Today the best is The Tournament Director (
http://www.thetournamentdirector.net/index.html)
It has everything you need: Blid Structure, anything related to money, chip set management, auto-balance of tables, etc.
It's 40 dollars and is the app used by every casino.
If you are on mobile / want a free app, go for Blinds Are Up!, you can edit almost every parameter of your tourney, it has a better chip set manager and Structure generator than TTD but it also lacks more precise stuff like Player Database, Seat management, etc.
Overrall, if you can afford 40 bucks, buy TTD, if not install BAR.